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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs8119719 chr20:1347896 A/G FKBP1AP1 chr19:58337829-58338146:- 0.69 8.62 7.95E-15 Box Plot
UCEC rs854990 chr11:49224241 C/T FOLH1B chr11:89372395-89431886:+ 0.57 7.37 9.94E-12 Box Plot
UCEC rs9295701 chr6:26627508 T/C ZNF322B chr9:99957633-99961910:- 0.66 7.17 3.11E-11 Box Plot
UCEC rs9467813 chr6:26626036 C/G ZNF322B chr9:99957633-99961910:- 0.66 7.14 3.59E-11 Box Plot
UCEC rs9586195 chr13:88628920 T/A LRRC37A2 chr17:44588877-44633016:+ -0.58 -7 7.6E-11 Box Plot
UCEC rs9896243 chr17:44826056 C/G LRRC37A4 chr17:43578685-43595516:- -0.65 -7.81 8.49E-13 Box Plot
UCEC rs9987408 chr8:3957134 T/C PSTPIP1 chr15:77285700-77329673:+ 0.36 7.05 5.93E-11 Box Plot
UCS rs113305890 chr19:4680128 A/T DEFB118 chr20:29956421-29961726:+ 0.91 14.17 2.42E-15 Box Plot
UCS rs12217469 chr10:127234806 A/G DEFB118 chr20:29956421-29961726:+ -1.55 -10.84 3.04E-12 Box Plot
UCS rs12407004 chr1:42366129 A/C DEFB118 chr20:29956421-29961726:+ -0.87 -11.38 8.7E-13 Box Plot
UCS rs1286810 chr1:62284703 A/C C10orf96 chr10:118083940-118139540:+ 1.27 10.89 2.67E-12 Box Plot
UCS rs17249964 chr17:31972644 T/G DEFB118 chr20:29956421-29961726:+ 0.9 17.66 4.67E-18 Box Plot
UCS rs17249978 chr17:31972830 A/G DEFB118 chr20:29956421-29961726:+ 0.9 17.66 4.67E-18 Box Plot
UVM rs113282645 chr6:17188995 C/T GCG chr2:162999383-163008914:- 0.69 11.17 9.02E-16 Box Plot
UVM rs131703 chr22:23652201 A/G POM121L10P chr22:25053448-25054732:- 1.06 8.91 2.96E-12 Box Plot